Convert DNannotator feature table into GFF format

 

1. Please give the DNannotator feature table file:

2. Prepare also an input data for the "customTrack" of Genome Browser

    Yes.  Name the track as
    No.

3. The GFF format file will be delivered to:

Email address

choice of output in gzip compressed format:

Your email box accepts message size limit of  per message

If your input data file is from a Mac machine, please be sure to check this box

 

GFF is proposed by Sanger Center as standard for annotation data exchange.
 

Contents of DNannotator feature table vs. GFF standard:

DNannotator: <gDNA_ID> <feature type> <orientation> <start> <end> <feature name><additional note>
GFF: <seqname> <source> <feature type> <start> <end> <score> <orientation> <frame> <feature_name>

Note: In the GFF supported by Genome Browser, <source> <feature type> and <frame> are not visible.  And, unfortunately, no other information such as allele codes could be provided in this very compact format.  To use this function in Genome Browser, make sure that you did annotation on Genome Browser's latest freeze.